vcf2phylip¶
vcf2phylip converts SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis. The bundle packages version 2.9.
Usage example¶
The following command can be executed in the terminal to load the bundle:
The vcf2phylip command can be run as shown below:
The vcf2phylip_shell command can be used to access a shell in the bundle.
Performance notes¶
No performance notes available
Recommended resources per session¶
No recommended resources available
Benchmarks¶
No benchmarks available.
Community guides and tutorials¶
- No community guides available.
Official site and documentation¶
Licensing information¶
vcf2phylip is licensed under the GNU GPLv3 license.
Primary citation¶
External guides and resources¶
- If you know of a guide/tutorial that you have found useful, please help us share it by contacting the HPC staff at hpc@ufs.ac.za