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HyPhy (Hypothesis Testing using Phylogenies)

HyPhy is a software package for comparative sequence analysis using stochastic evolutionary models. The bundle packages version 2.5.62.

Usage example

The following command can be executed in the terminal to load the bundle:

module load hyphy

The HyPhy commands can be run as shown below:

hyphy
HYPHYMPI

The hyphy_shell command can be used to access a shell in the bundle.

hyphy_shell

Performance notes

No performance notes available

No recommended resources available

Benchmarks

No benchmarks available.

Community guides and tutorials

  • No community guides available.

Official site and documentation

Licensing information

HyPhy is released as is.

Primary citation

External guides and resources

  • If you know of a guide/tutorial that you have found useful, please help us share it by contacting the HPC staff at hpc@ufs.ac.za