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EggNOG-mapper (Hypothesis Testing using Phylogenies)

EggNOG-mapper is a tool for fast functional annotation of novel sequences. The bundle packages version 2.1.12.

Usage example

The following command can be executed in the terminal to load the bundle:

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module load eggnogmapper

The EggNOG-mapper commands can be run as shown below:

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create_dbs.py
download_eggnog_data.py
emapper.py

The eggnogmapper_shell command can be used to access a shell in the bundle.

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eggnogmapper_shell

Performance notes

No performance notes available

No recommended resources available

Benchmarks

No benchmarks available.

Community guides and tutorials

  • No community guides available.

Official site and documentation

Licensing information

EggNOG-mapper is licensed under the GNU AGPL.

Primary citation

External guides and resources

  • If you know of a guide/tutorial that you have found useful, please help us share it by contacting the HPC staff at hpc@ufs.ac.za