Minimap2¶

Minimap2 is a sequence alignment program that aligns DNA or mRNA sequences against a large reference database. The minimap2 bundle packages version 2.26.

UFS HPC Usage Example¶

The following command can be executed in the terminal to load the bundle:

1	`module load minimap2`

The Minimap2 utilities can be run as shown as below:

1	`minimap2`

The minimap2_shell commmand can be used to access a shell in the minimap2 bundle.

1	`minimap2_shell`

Performance Notes¶

No performance notes available

Recommended resources per session¶

No recommended resources available

Benchmarks¶

No benchmarks available.

UFS HPC Community Guides and Tutorials¶

No community guides available.

Official site and documentation¶

Licensing Information¶

Minimap2 is licensed under the MIT license.

Primary citation¶

External Guides and Resources¶

If you know of a guide/tutorial that you have found useful, please help us share it by contacting the HPC staff at hpc@ufs.ac.za