ea-utils¶

Command-line tools for processing biological sequencing data, for example: Barcode demultiplexing, adapter trimming, etc. The eautils bundle packages version 1.1.2.537.

UFS HPC Usage Example¶

The following command can be executed in the terminal to load the bundle:

1	`module load eautils`

The ea-utils utilities can be run as shown as below:

fastq-join
fastq-mcf
fastq-multx
fastq-stats

The eautils_shell commmand can be used to access a shell in the eautils bundle.

1	`eautils_shell`

Performance Notes¶

No performance notes available

Recommended resources per session¶

No recommended resources available

Benchmarks¶

No benchmarks available.

UFS HPC Community Guides and Tutorials¶

No community guides available.

Official site and documentation¶

Licensing Information¶

ea-utils is provided as-is.

Primary citation¶

External Guides and Resources¶

If you know of a guide/tutorial that you have found useful, please help us share it by contacting the HPC staff at hpc@ufs.ac.za