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RepeatMasker

RepeatMasker screens DNA sequences for interspersed repeats and low complexity DNA sequences. The bundle packages version 4.1.7p1.

Usage example

The following command can be executed in the terminal to load the bundle:

module load repeatmasker

The RepeatMasker commands can be run as shown below:

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RepeatMasker
RepeatProteinMask
famdb.py

The repeatmasker_shell command can be run for a shell in the bundle.

repeatmasker_shell

Performance notes

No performance notes available

No recommended resources available

Benchmarks

No benchmarks available.

Community guides and tutorials

  • No community guides available.

Official site and documentation

Licensing information

RepeatMasker is licensed under the Open Source License v2.1.

Primary citation

External guides and resources

  • If you know of a guide/tutorial that you have found useful, please help us share it by contacting the HPC staff at hpc@ufs.ac.za