NanoFilt¶
NanoFilt can be used to filter on quality and/or read length, and optional trimming after passing filters. NanoFilt version 2.8.0 is packaged, however, NanoFilt does not receive any updates, please consider using chopper.
Usage example¶
The following command can be executed in the terminal to load the bundle:
NanoFilt can be run as shown as below:
The nanofilt_shell command can be used to access a shell in the bundle.
Performance notes¶
No performance notes available
Recommended resources per session¶
No recommended resources available
Benchmarks¶
No benchmarks available.
Community guides and tutorials¶
- No community guides available.
Official site and documentation¶
Licensing information¶
NanoFilt is licensed under the GNU GPLv3 license.
Primary citation¶
External guides and resources¶
- If you know of a guide/tutorial that you have found useful, please help us share it by contacting the HPC staff at hpc@ufs.ac.za