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MetaBAT

MetaBAT is a statistical framework for reconstructing genomes from metagenomic data. The bundle packages version 2.17.

Usage example

The following command can be executed in the terminal to load the bundle:

module load metabat

MetaBAT can be run as shown below:

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2
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metabat
metabat2
jgi_summarize_bam_contig_depths

The metabat_shell command can be used to access a shell in the bundle.

Performance notes

No performance notes available

No recommended resources available

Benchmarks

No benchmarks available.

Community guides and tutorials

  • No community guides available.

Official site and documentation

Licensing information

MetaBAT is licensed under a proprietary license.

Primary citation

External guides and resources

  • If you know of a guide/tutorial that you have found useful, please help us share it by contacting the HPC staff at hpc@ufs.ac.za