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Flye

Flye is a de novo assembler for single-molecule sequencing reads. The flye bundle packages version 2.9.2.

UFS HPC Usage Example

The following command can be executed in the terminal to load the bundle:

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module load flye
The Flye utilities can be run as shown below: 
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flye
flye-minimap2
flye-modules
flye-samtools
The flye_shell commmand can be used to access a shell in the flye bundle. 
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flye_shell

Performance Notes

No performance notes available

No recommended resources available

Benchmarks

No benchmarks available.

UFS HPC Community Guides and Tutorials

  • No community guides available.

Official site and documentation

Licensing Information

Flye is licensed under the BSD three clause license.

Primary citation

External Guides and Resources

  • If you know of a guide/tutorial that you have found useful, please help us share it by contacting the HPC staff at hpc@ufs.ac.za